BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A11SP1|AL429507
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1644 0.0
>3x_Contig1428
Length = 9146
Score = 1644 bits (825), Expect = 0.0
Identities = 838/847 (98%)
Strand = Plus / Minus
Query: 1 gatccgtttgaagttctgcaatgctacttgttcctcagataatgcattgttcggcccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4026 gatccgtttgaagttctgcaatgctacttgttcctcagataatgcattgttcggcccctc 3967
Query: 61 atatgagctgattgcgcttcgcacgtccaatagtgatcgtgataaggaattttttaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 atatgagctgattgcgcttcgcacgtccaatagtgatcgtgataaggaattttttaagag 3907
Query: 121 ggaaatctgttttaatctgtacaaaagatcgttattggacaaatttaattctgagatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3906 ggaaatctgttttaatctgtacaaaagatcgttattggacaaatttaattctgagatggt 3847
Query: 181 aataaggtcttccttggattgatgtaggaaccatgtcaatatcttgatttccagctttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 aataaggtcttccttggattgatgtaggaaccatgtcaatatcttgatttccagctttag 3787
Query: 241 ttttaatcttaatctagcagagccagctctgttaaattgcgaagttcgttcttctattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3786 ttttaatcttaatctagcagagccagctctgttaaattgcgaagttcgttcttctattgt 3727
Query: 301 tactagtatcacagtttcaagcaatcttcgcagaacatcgatggtagccatcgacgtaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3726 tactagtatcacagtttcaagcaatcttcgcagaacatcgatggtagccatcgacgtaag 3667
Query: 361 tggcgtggatagttgtgatagagtcattgaatcaractgagtsgtatctataacaagatc 420
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 3666 tggcgtggatagttgtgatagagtcattgaatcaaactgagtcgtatctataacaagatc 3607
Query: 421 agatgtktccaccggkgcgtttacggcagcgacctcatcaccaatcacgtgatckatatc 480
|||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 3606 agatgtttccaccggtgcgtttacggcagcaacctcatcaccaatcacgtgatctatatc 3547
Query: 481 atcttcgtttgccgttgccttgtccatcaaaccatctccttgatttagatcgaratcgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3546 atcttcgtttgccgttgccttgtccatcaaaccatctccttgatttagatcgaaatcgtc 3487
Query: 541 aacacgatccggagacggtacttgtatgtsaggaaaactctggtcgtcctgttccgtcaa 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3486 aacacgatccggagacggtacttgtatgtcaggaaaactctggtcgtcctgttccgtcaa 3427
Query: 601 ttgactatctgtgaccaaatcgccatcttctctcaactctggttcaattaccacatcgta 660
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3426 ttgactatctgtaaccaaatcgccatcttctctcaactctggttcaattaccacatcgta 3367
Query: 661 atcaatagttcttgaagcactaccacgctgcctgtacagcaacttcaaatgtcgttgctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3366 atcaatagttcttgaagcactaccacgctgcctgtacagcaacttcaaatgtcgttgctt 3307
Query: 721 caaagcatccatgagaagttgagtaaaattggctgacagtgctggctatcggctacatgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 caaagcatccatgagaagttgagtaaaattggctgacagtgctggctatcggctacatgt 3247
Query: 781 cgtgctctgtgctgcaaaataaacaacgccttgttctatacaggatatagtgtaaatgcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3246 cgtgctctgtgctgcaaaataaacaacgccttgttctatacaggatatagtgtaaatgcc 3187
Query: 841 ataacct 847
|||||||
Sbjct: 3186 ataacct 3180
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5176
Number of Sequences: 1807
Number of extensions: 5176
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)